PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.2490s0030.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 212aa    MW: 23775.5 Da    PI: 6.2944
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.2490s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-1986136255
                     AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                              y+GVr+++ +g+++AeIrd + ng  +r++lg+f++ae Aa a+++a+ +++g
  SapurV1A.2490s0030.1.p  86 SYRGVRRRP-WGKFAAEIRDSTRNG--RRVWLGTFDSAEAAALAYDQAAFSMRG 136
                             69*******.**********44465..*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.29E-1985145No hitNo description
Gene3DG3DSA:3.30.730.101.0E-2986145IPR001471AP2/ERF domain
PfamPF008471.0E-1486136IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-2286146IPR016177DNA-binding domain
SMARTSM003809.1E-3786150IPR001471AP2/ERF domain
PROSITE profilePS5103223.24886144IPR001471AP2/ERF domain
PRINTSPR003673.4E-108798IPR001471AP2/ERF domain
PRINTSPR003673.4E-10110126IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MDASIFHSAN SDFSPESSFG SPDSFYSQTF NQSSLPFNEN DSDEMLLFEL ISEATQETSR  60
ATFYNGIVKE EEVSSVARKK PDKEKSYRGV RRRPWGKFAA EIRDSTRNGR RVWLGTFDSA  120
EAAALAYDQA AFSMRGPGTI LNFPVERVSE SLKDMKCSTH HEDGCSPVVA LKRKYSMKRK  180
LGSRGKKERD VRIENVLVLE DPGADYLDQT C*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A5e-2783145264ATERF1
2gcc_A5e-2783145264ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002315707.11e-130ETHYLENE RESPONSE FACTOR 1 family protein
SwissprotQ8LDC85e-71ERF92_ARATH; Ethylene-responsive transcription factor 1B
TrEMBLB9HU971e-130B9HU97_POPTR; ETHYLENE RESPONSE FACTOR 1 family protein
STRINGPOPTR_0010s08300.11e-129(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31133199
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-62ethylene response factor 1